| 1. | Geiger,
T., Wisniewski, J. R., Cox, J., Zanivan, S., Kruger,
M., Ishihama, Y. and Mann, M. Use of stable
isotope labeling by amino acids in cell culture
as a spike-in standard in quantitative proteomics. Nature
Protocols. 2011. 6, 147-157. [PubMed] |
| 2. | Bindschedler,
L. V. and Cramer, R. Fully automated software
solution for protein quantitation by global metabolic
labeling with stable isotopes. Rapid Communications
in Mass Spectrometry : RCM. 2011. 25, 1461-1471. [PubMed] |
| 3. | Palmisano,
G., Lendal, S. E. and Larsen, M. R. Titanium
dioxide enrichment of sialic acid-containing glycopeptides. Methods
in Molecular Biology. 2011. 753, 309-322. [PubMed] |
| 4. | Thompson,
A. J. and Williamson, R. Protocol for quantitative
proteomics of cellular membranes and membrane rafts. Methods
in Molecular Biology. 2010. 658, 235-253. [PubMed] |
| 5. | Rechavi,
O., Kalman, M., Fang, Y., Vernitsky, H., Jacob-Hirsch,
J., Foster, L. J., Kloog, Y. and Goldstein, I. Trans-SILAC:
sorting out the non-cell-autonomous proteome. Nature
Methods. 2010. 7, 923-927. [PubMed] |
| 6. | Schwanhausser,
B., Gossen, M., Dittmar, G. and Selbach, M. Global
analysis of cellular protein translation by pulsed
SILAC. Proteomics. 2009. 9, 205-209. [PubMed] |
| 7. | Foster
L. J. Moving closer to the lipid raft proteome
using quantitative proteomics. Methods in
Molecular Biology. 2009. 528, 189-199. [PubMed] |
| 8. | Zhang,
G. and Neubert, T. A. Use of stable isotope
labeling by amino acids in cell culture (SILAC) for
phosphotyrosine protein identification and quantitation. Methods
in Molecular Biology. 2009. 527, 79-171. [PubMed] |
| 9. | Cox,
J., Matic, I., Hilger, M., Nagaraj, N., Selbach,
M., Olsen, J. V. and Mann, M. A practical guide
to the MaxQuant computational platform for SILAC-based
quantitative proteomics. Nature Protocols. 2009.
4, 698-705. [PubMed] |
| 10. | Harsha,
H. C., Molina, H. and Pandey, A. Quantitative
proteomics using stable isotope labeling with amino
acids in cell culture. Nature Protocols. 2008.
3, 505-516. [PubMed] |
| 11. | Schlosser,
A., Amanchy, R. and Otto, H. Identification
of tyrosine-phosphorylation sites in the nuclear
membrane protein emerin. The FEBS Journal. 2006.
273, 3204-3215. [PubMed] |
| 12. | Selbach,
M. and Mann, M. Protein interaction screening
by quantitative immunoprecipitation combined with
knockdown (QUICK). Nature Methods. 2006.
3, 981-983. [PubMed] |
| 13. | Ong,
S. E. and Mann, M. A practical recipe for stable
isotope labeling by amino acids in cell culture (SILAC). Nature
Protocols. 2006. 1, 2650-2660. [PubMed] |
| 14. | Ong,
S. E., Mittler, G. and Mann, M. Identifying
and quantifying in vivo methylation sites by heavy
methyl SILAC. Nature Methods. 2004.
1, 119-126. [PubMed] |
| 15. | Ong,
S. E., Foster, L. J. and Mann, M. Mass spectrometric-based
approaches in quantitative proteomics. Methods. 2003.
29, 124-130. [PubMed] |